Analysing dose-mortality data when doses are subject to error

In microbial control of insect pests, the dose of pathogen that a subject actually receives varies because of variation in individual intakes. Variation in intake of a given concentration is equivalent to varying the concentration for a given intake. The main effect of such variation is to flatten the dose-response curve. If the dose-variation is known, a correction for this effect can be made; new estimates for the slope and intercept of the probit line are given. However, the correction increases the variance of the estimates. The theory is illustrated with an example in which the diamond-backed month, Plutella xylostella, was fed varying doses of the specific granulosis virus PxGV; intake assays using similar larvae showed the coefficient of variation of intake volume to be about 40%. Simulation studies showed that correction may be practically important only for the estimation of extreme percentiles, e.g. LD₉₅s.     

Rediscovery of Nebela ansata (Amoebozoa: Arcellinida) in eastern North America: biogeographical implications

Aim The question whether free‐living protists are generally cosmopolitan is currently a matter of debate. In this study we investigate the geographical distribution of a distinctive testate amoeba species, Nebela ansata, and use our data to assess the potential for highly restricted distribution patterns in some protist species. Location Global. Methods We analysed (1) 3400 testate amoeba publications from North America and other continents, (2) unpublished slides of the Penard Collection of the Natural History Museum, London, UK, and (3) 104 Sphagnum samples from eastern North America. Non‐metric multidimensional scaling (NMDS) was used to visualize the similarities in testate amoeba community composition among 1012 North American samples, including two communities that contained N. ansata. Results We rediscovered N. ansata at a site in New Jersey located close to its type locality, and in Nova Scotia. We also report the existence of an apparently unpublished museum specimen originally collected from New Jersey. Our extensive literature survey confirmed the presence of this species only in the temperate part of eastern North America. The NMDS revealed that communities with N. ansata were less similar to each other than to communities from other parts of North America, suggesting that favourable habitats for N. ansata occur in other Sphagnum‐dominated peatlands, a habitat type that has been extensively sampled in North America and elsewhere. Main conclusions These data provide an unusually convincing case of a free‐living microorganism with a very limited distribution range in the temperate part of eastern North America. The remarkably restricted distribution of N. ansata highlights the extent of our ignorance about the natural history of free‐living microorganisms, and raises questions about the lack of attention to microbial diversity in conservation biology.     

Reflections onChloroflexus

A personal historic account is presented of the discovery of the anoxygenic filamentous bacteria of hot springs:Heliothrix oregonensis andChloroflexus aurantiacus. The later discoveries of marine and hypersaline forms are also described.     

CARBONIC ANHYDRASE IN THE MARINE DIATOM THALASSIOSIRA WEISSFLOGII (BACILLARIOPHYCEAE)1

The zinc metalloenzyme carbonic anhydrase plays a critical role in inorganic carbon acquisition in marine diatoms, thus conferring on zinc a key role in oceanic carbon cycling. As a first step in determining the location and function of carbonic anhydrase (CA) in Bacillariophyceae, we purified and partially sequenced CA from T. weissflogii (Gru) Fryxell et Hasle (TWCA1) and cloned the corresponding cDNA (twca1). The twca1 sequence is different from other known algal carbonic anhydrase genes, and encodes a protein of roughly 34 kDa. The amino terminal amino acids sequenced from purified TWCA1 are 72 residues downstream of the putative starting methionine predicted by twca1. This difference may be due to the presence of a short-lived signal sequence designed to guide the enzyme to the correct cellular location. The absence of any homology between TWCA1 and previously sequenced CAs from Chlorophyceae may indicate either convergent evolution or that carbon acquisition represents a fundamental physiological difference among algal phyla.     

Use of anin situ labeling technique for the determination of seasonal14C distribution in Ponderosa pine

A¹⁴C labeling apparatus was developed to permit the labeling of four-year-old Ponderosa pine with¹⁴CO₂ in the field. The labeling system is a completely closed canopy system with¹⁴CO₂ monitored by a GM tube ratemeter apparatus. The level of¹⁴CO₂ corresponding to ambient levels is monitored by a microloggercomputer which controls a¹⁴CO₂ generating system. The generated¹⁴CO₂ is mixed in the canopy by circulating the atmosphere with 12V diaphram pumps. The portable system requires little operator attention. At approximately monthly intervals over a one-year period two four-year-old Ponderosa pine trees were labeled for three to five days using this labeling apparatus. After an assimilate distribution period, one tree was excavated and analyzed for¹⁴C distribution. During late spring and early summer most of the carbon assimilated (>60%) was found in the active growing tips and new needles, with little being allocated to the roots (<10%) or woody material (<20%). During mid to late fall there was an increase in root labeling along with an increase in carbon going to woody material. Over the winter period, most of the fixed carbon (65%) resided in the older leaves. The early spring labeling period showed another pulse of root labeling along with some labeling of woody tissues.     

Rice straw decomposition in rice-field soil

Rice straw, buried in a rice-field during the dry season decomposed at a rate of 0.0075 day-1. Seventy five percent of the biomass, 70 percent carbon, 50 percent nitrogen and 30 percent phosphorus remained after 139 days of decomposition. Rice straw decomposition furnished 33% N and 8% P of the total nitrogen and phosphorus provided by man.     

Benthic nematodes in acidified lakes: case of a neglected grazer

Abundance and composition of nematode fauna were examined in the benthic microbial mats and upper sediment layer of the littoral of acidified (pH 4.6 to 5.7) lakes. Nematodes constituted from 58% to 90% of all the invertebrates present (excluding protozoans and rotifers). In the examined material, the majority of nematodes was represented by 3 taxa of which Ironus was found specifically associated with the mats. It was concluded that the persistence of benthic mats may be linked to the metabolic activity of the associated nematode fauna.